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| Registros recuperados: 152 | |
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| Roeva,Olympia; Pencheva,Tania; Tzonkov,Stoyan; Arndt,Michael; Hitzmann,Bernd; Kleist,Sofia; Miksch,Gerchard; Friehs,Karl; Flaschel,Erwin. |
| The paper presents the implementation of multiple model approach to modelling of Escherichia coli BL21(DE3)pPhyt109 fed-batch cultivation processes for an extracellular production of bacterial phytase. Due to the complex metabolic pathways of microorganisms, the accurate modelling of bioprocesses is rather difficult. Multiple model approach is an alternative concept which helps in modelling and control of complex processes. The main idea is the development of a model based on simple submodels for the purposes of further high quality process control. The presented simulations of E. coli fed-batch cultivation show how the process could be divided into different functional states and how the model parameters could be obtained easily using genetic algorithms.... |
| Tipo: Journal article |
Palavras-chave: Genetic algorithms; Modelling; Multiple model approach. |
| Ano: 2007 |
URL: http://www.scielo.cl/scielo.php?script=sci_arttext&pid=S0717-34582007000400012 |
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| Peters,Jan; Wieme,Vanessa; Boeckx,Pascal; Samson,Roeland; Godoy,Roberto; Oyarzún,Carlos; Verhoest,Niko. |
| Ecohydrology investigates how hydrological processes affect plant growth and vice versa. As these mutual interactions are important in many ecosystems, ecohydrology has wide applicability. An important aspect of ecohydrological research is the assessment and prediction of the occurrence of plant species or vegetation types in relation to hydrological or hydrogeochemical habitat conditions. Several models have been developed (e.g. DEMNAT, ICHORS, ITORS, ITORS-VL). All of these models are data driven. Consequently a monitoring network has to be installed, possibly in addition to existing databases. These networks are ecosystem specific but the most widely monitored variables are: water table depth, electric conductivity of groundwater, soil moisture content... |
| Tipo: Journal article |
Palavras-chave: Ecohydrology; Modelling; Vegetation; Hydrology; Decision support systems. |
| Ano: 2005 |
URL: http://www.scielo.cl/scielo.php?script=sci_arttext&pid=S0717-66432005000200007 |
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| Alunno-bruscia, Marianne; Bourles, Yves; Maurer, Daniele; Robert, Stephane; Mazurie, Joseph; Gangnery, Aline; Goulletquer, Philippe; Pouvreau, Stephane. |
| Many studies based on bioenergetics growth models have investigated the effects of environmental factors on oyster (Crassostrea gigas) growth and physiology. However, most of these models are site-specific and cannot be applied to other culture sites without the re-estimation of parameters or re-formulation of some processes. We aimed to develop a generic growth model suitable for application in contrasting environments, with a constant set of parameters. We tested the oyster-DEB model (Bourlès et al. 2009) for the stimulation of C. gigas growth in different cohorts (spats and adults) at major shellfish culture sites in France, in several years: Arcachon (1993–1994); Marennes-Oléron (2007); Quiberon (1999, 2000, 2001); Rade de Brest (2008); Baie du... |
| Tipo: Text |
Palavras-chave: DEB theory; Modelling; Bivalves; Crassostrea gigas; Phytoplankton; Temperature effect; Coastal environment.. |
| Ano: 2011 |
URL: http://archimer.ifremer.fr/doc/00043/15403/12762.pdf |
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| Demory, David; Combe, Charlotte; Hartmann, Philipp; Talec, Amelle; Pruvost, Eric; Hamouda, Raouf; Souille, Fabien; Lamarea, Pierre-olivier; Bristeau, Marie-odile; Sainte-marie, Jacques; Rabouille, Sophie; Mairet, Francis; Sciandra, Antoine; Bernard, Olivier. |
| Hydrodynamics in a high-rate production reactor for microalgae cultivation affects the light history perceived by cells. The interplay between cell movement and medium turbidity leads to a complex light pattern, whose forcing effects on photosynthesis and photoacclimation dynamics are nontrivial. Hydrodynamics of high density algal ponds mixed by a paddle wheel has been studied recently, although the focus has never been on describing its impact on photosynthetic growth efficiency. In this multidisciplinary downscaling study, we first reconstructed single cell trajectories in an open raceway using an original hydrodynamical model offering a powerful discretization of the Navier-Stokes equations tailored to systems with free surfaces. The trajectory of a... |
| Tipo: Text |
Palavras-chave: Photosynthesis; Hydrodynamics; Modelling; Photoacclimation; Dunaliella salina; Non-photochemical quenching. |
| Ano: 2018 |
URL: https://archimer.ifremer.fr/doc/00445/55692/57352.pdf |
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| Peck, Myron A.; Arvanitidis, Christos; Butenschon, Momme; Canu, Donata Melaku; Chatzinikolaou, Eva; Cucco, Andrea; Domenici, Paolo; Fernandes, Jose A.; Gasche, Loic; Huebert, Klaus B.; Hufnagl, Marc; Jones, Miranda C.; Kempf, Alexander; Keyl, Friedemann; Maar, Marie; Mahevas, Stephanie; Marchal, Paul; Nicolas, Delphine; Pinnegar, John K.; Rivot, Etienne; Rochette, Sebastien; Sell, Anne F.; Sinerchia, Matteo; Solidoro, Cosimo; Somerfield, Paul J.; Teal, Lorna R.; Travers-trolet, Morgane; Van De Wolfshaar, Karen E.. |
| We review and compare four broad categories of spatially-explicit modelling approaches currently used to understand and project changes in the distribution and productivity of living marine resources including: 1) statistical species distribution models, 2) physiology-based, biophysical models of single life stages or the whole life cycle of species, 3) food web models, and 4) end-to-end models. Single pressures are rare and, in the future, models must be able to examine multiple factors affecting living marine resources such as interactions between: i) climate-driven changes in temperature regimes and acidification, ii) reductions in water quality due to eutrophication, iii) the introduction of alien invasive species, and/or iv) (over-)exploitation by... |
| Tipo: Text |
Palavras-chave: Distribution; Modelling; Habitat; Resources; Man-induced effects. |
| Ano: 2018 |
URL: https://archimer.ifremer.fr/doc/00337/44845/44436.pdf |
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| Gernigon, Laurent; Lucazeau, Francis; Brigaud, Frederic; Ringenbach, Jean-claude; Planke, Sverre; Le Gall, Bernard. |
| High P-wave velocities (7.1-7.8 km/s) lower crustal bodies (LCBs) imaged along volcanic margins are commonly interpreted as plume and break-up-related thick mafic underplating. This interpretation is partly challenged in this paper based on new seismic observations and modelling of the outer Voring Basin (Norway). An exceptional strong amplitude reflection, the T Reflection, is particularly well defined below the North Gjallar Ridge (NGR) between 7 and 8 s TWT. The T Reflection is located near the volcanic lava flows emplaced during the NE Atlantic breakup (similar to 55-54 Ma ago) and coincides with the top of the LCB, forming a mid-crustal dome. Based on structural and temporal relationships, we show that the dome clearly influences the structural... |
| Tipo: Text |
Palavras-chave: Mantle plume; Norwegian margin; Underplating; Breakup; Modelling; Rifting; Volcanic margins. |
| Ano: 2006 |
URL: http://archimer.ifremer.fr/doc/2006/publication-1042.pdf |
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| Meleder, Vona; Barille-boyer, Anne-laure; Baud, Jean-pierre; Barille, Laurent; Cognie, Bruno; Rosa, Philippe. |
| The traditional fattening of the oyster Crassostrea gigas in oyster ponds of the French Atlantic Coast is submitted to natural environmental fluctuations. In order to reduce the growth variability of the soft parts of the bivalve, an intensive fattening process was developed, where the conditions of temperature, particulate organic and inorganic matter (POM and PIM) are controlled. This process relies on the production of the diatom Skeletonema costatum, which is then distributed to the oysters at an average concentration of 4–5 mg POM·L–1. An ecophysiological model of the oyster C. gigas, which simulates the evolution of somatic and gonad–reserve compartments, was applied to these conditions in order to analyse the bivalve responses. Experimentation was... |
| Tipo: Text |
Palavras-chave: Modélisation; Affinage; Ecophysiologie; Crassostrea gigas; Skeletonema costatum; Modelling; Oyster fattening; Ecophysiology; Crassostrea gigas; Skeletonema costatum. |
| Ano: 2001 |
URL: http://archimer.ifremer.fr/doc/00021/13248/10285.pdf |
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| Jacq, E; Moal, Jeanne; Samain, Jean-francois; Corre, S; Daniel, J; Nicolas, Jean-louis; Cochard, Jean-claude; Fera, P. |
| Larval rearings were performed with seawater either freshly pumped or after storage in a pond. Concerning bacterial populations these waters were characterized by a high diversity, little sized bacteria whose few of them (1%) were cultivable on Zobell medium. In the tanks, the bacterial ecosystem was modified by the presence of antibiotics, larvae and algae: the diversity was lowered, the cellular volume was increased by a factor 2 to 5, 100% bacteria were cultivable and chloramphenicol resistant, and their metabolism changed. Taxonomic screening showed no differences among the two waters neither at the beginning nor at the end of the rearings. However, depending on the water (stored or not) differences were identified for bacterial physiology and... |
| Tipo: Text |
Palavras-chave: Marine aquaculture; Pond culture; Scallop culture; Ecology; Antibiotics; Organic matter; Grazing; Carbohydrates; Mathematical models; Modelling; Growth; Bacterial diseases; Biological production; Culture tanks; Larvae; Rearing. |
| Ano: 1992 |
URL: http://archimer.ifremer.fr/doc/1992/acte-914.pdf |
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| Bourles, Yves; Alunno-bruscia, Marianne; Pouvreau, Stephane; Tollu, Guillaume; Leguay, Didier; Arnaud, Christophe; Goulletquer, Philippe; Kooijman, S. |
| A bio-energetic model, based on the DEB theory exists for the Pacific oyster Crassostrea gigas. Pouvreau et al. [Pouvreau, S., Bourles, Y., Lefebvre, S., Gangnery, A., Alunno-Bruscia, M., 2006. Application of a dynamic energy budget model to the Pacific oyster, C. gigas, reared under various environmental conditions. J. Sea Res. 56, 156167.] successfully applied this model to oysters reared in three environments with no tide and low turbidity, using chlorophyll a concentration as food quantifier. However, the robustness of the oyster-DEB model needs to be validated in varying environments where different food quantifiers reflect the food available for oysters, as is the case in estuaries and most coastal ecosystems. We therefore tested the oyster-DEB... |
| Tipo: Text |
Palavras-chave: Coastal Environment; Temperature effect; Food Quantifiers; Crassostrea gigas; Bivalves; Modelling; DEB theory. |
| Ano: 2009 |
URL: http://archimer.ifremer.fr/doc/2009/publication-6436.pdf |
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| Bailly Du Bois, P.; Dumas, Franck; Solier, L.; Voiseux, C.. |
| Appropriate field data are required to check the reliability of hydrodynamic models simulating the dispersion of soluble substances in the marine environment. This study deals with the collection of physical measurements and soluble tracer data intended specifically for this kind of validation. The intensity of currents as well as the complexity of topography and tides around the Cap de La Hague in the centre of the English Channel make it one of the most difficult areas to represent in terms of hydrodynamics and dispersion. Controlled releases of tritium-in the form of HTO-are carried out in this area by the AREVA-NC plant, providing an excellent soluble tracer. A total of 14,493 measurements were acquired to track dispersion in the hours and days... |
| Tipo: Text |
Palavras-chave: Modelling; Data collection; Tritium; Dispersion; Tidal dynamics; English Channel. |
| Ano: 2012 |
URL: http://archimer.ifremer.fr/doc/00077/18775/16484.pdf |
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| Cognard, J. Y.; Creac'Hcadec, R.; Da Silva, L. F. M.; Teixeira, F. G.; Davies, Peter; Peleau, Michel. |
| The modelling of the non-linear behaviour of ductile adhesives requires a large experimental database in order to represent accurately the strains which are strongly dependent on the tensile-shear loading combination. Various pressure-dependent constitutive models can be found in the literature, but only a few experimental results are available, for instance, to represent accurately the initial yield surface taking into account the two stress invariants, hydrostatic stress, and von Mises equivalent stress. This paper presents the possibility of combining the use of tests on bulk specimens and tests on bonded assemblies, which strongly limit the influence of the edge effects, with a pressure vessel especially designed to study the influence of hydrostatic... |
| Tipo: Text |
Palavras-chave: Adhesive testing; Finite element analysis; Hydrostatic stress; Modelling; Non-linear behaviour; Yield surface. |
| Ano: 2011 |
URL: http://archimer.ifremer.fr/doc/00048/15917/13374.pdf |
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| Garnier, Josette; Riou, Philippe; Le Gendre, Romain; Ramarson, Antsiva; Billen, Gilles; Cugier, Philippe; Schapira, Mathilde; Théry, Sylvain; Thieu, Vincent; Ménesguen, Alain. |
| The continental coastal waters of the Eastern Channel, from Normandy to Hauts-de-France, are subject to the major influence of unbalanced nutrient inputs from inflowing rivers. Several episodes of harmful algal blooms (HABs) compromising fishing and shellfish farming activities have been observed at the coast. For a better understanding of how the land-to-sea aquatic continuum functions, the GRAFS-RIVERSTRAHLER river biogeochemical model was implemented to cover the watersheds of 11 rivers flowing into this area (including the Seine) and chained with the ecological marine ECO-MARS3D model, applied to the French Northern coastal zone. Human activities strongly impact on the functioning of coastal ecosystems. Specifically, for these fertile soils of Northern... |
| Tipo: Text |
Palavras-chave: Toxic microalgae; Pseudo-nitzschia spp.; River basins; Nutrient flows; Scenarios; Coastal zone ecosystem; Modelling. |
| Ano: 2019 |
URL: https://archimer.ifremer.fr/doc/00589/70076/68049.pdf |
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| Registros recuperados: 152 | |
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